There is no good reason for why UConn did not get high enough APR scores, true. Nate Miles incident aside, the rest of the kids who hurt the score should have been kept track of better.
However, there are a number of schools besides UConn that would be in hot water if this rule was in effect this year (13 of 68 NCAAT teams). If 20% of the NCAA field would have been ineligible this year, how many of the teams that failed to make the tournament would have been ineligible if the rules were implemented this year on all teams with no waivers or pardons? I would bet at least 10% of the 300+ schools.
UConn isn't the only team with APR issues, it just happens to be the only school not granted immunity to the rule or a waiver for next year.
Further, APR is just a silly metric. It let's teams say a kid who has 24 credits after his freshman year is on par to a senior who has 96 credits (not to mention credits towards an actual major). Who is actually closer to graduating? Both players are 4 points.
Let's not even get into how many rising seniors could be transferring teams in the future to be eligible to the NCAAT and how that will change recruiting and potentially cause issues with recruiting kids already on scholarship (which does happen already with mid-majors and the 5th year/grad school rule).
I am going to have to disagree with that. In 2009 UConn recruited four kids, all of whom are now gone for reasons that are purely basketball related. When you consider that transfers are, inexplicably, held to a higher standard than other early departures, it makes it easy to lose points based on those four kids alone. As of now, it doesn't appear that AO will cost us any points, but I'm pretty sure Trice and Smith lost us at least one point, and unless they were not meeting the requirements that a normal student athlete would have to meet, that's pretty much bull . I forget what kind of standing Coombs was in, but he might have lost us a point as well.
The 08 class included two transfers as well in Scottie Haralson and Nate Miles, so in total that's five transfers over the past five years, all of whom transferred because they were unhappy with playing time. Assuming they were meeting the requirements, it appears absolutely absurd that the NCAA is using this as evidence that our basketball players do not take class seriously. On a football team, you can certainly overcome these transfers, but in basketball you are working with a much smaller sample size. While there is no doubt UConn could have done a better job with the APR, I'm pretty sure would be safe if it wasn't for these transfers.
Secondly, I agree with you that UConn knew the rules and should have complied, however, I don't think that is the heart of the issue. What I have a big problem with is NCAA having a rule with consequence X, then keeping that same rule and changing it to consequence Y without giving anybody a heads up. That's not UConn breaking the rules, that's the NCAA dropping a nuclear bomb to try to prove a point without thinking it through.
If the rules were cut and dry, and UConn broke them, then they made their own bed. However, that wasn't the case at all, and UConn was one of the few schools willing to take a poor APR score at the expense of two scholarships. If the NCAA wants to change the rules, fine, but you have to grandfather it in.