IMO, Penn State's actions were so egregious and wrong that they did deserve some penalty, whether they broke a bylaw or not. What they did was certainly wrong, it was certainly illegal, and it certainly violated any basic human ethics, yet alone the NCAA ethics of the schools.
UConn's APR was none of those. Perhaps, arguably, it was "wrong", but there was no way its moral wrongness even comes remotely close to how wrong Penn State's actions were. And we've already had the discussion of whether UConn's actions were "right" and it got me a lot of heat, so let's not go there again. Right or wrong, UConn's actions were nowhere near the magnitude of Penn State's wrongness actions.
In Penn State's case, the NCAA needed to send a message. Even though there was no written NCAA "rule" they broke, they broke the laws of the United States of America, the laws of the Commonwealth of Pennsylvania, and the ethical beliefs shared by the NCAA and its schools. They absolutely deserved to be punished for that.
UConn is clearly a different circumstance. While the NCAA had to bend the rules in Penn State's case because of how egregious their actions were, the same cannot be said about UConn's case. That being said, I only bring this complaint up because you did first. It is completely tasteless to use this despicable and sad situation as ammunition in the NCAA-UConn saga.