1999 in a heartbeat. They lost 2 games all year. One to Miami by 2. One to Syracuse without Rip and Jake. The team they beat in the finals received as much hype as any college team since the FAB 5/UNLV of that decade. They just ran a St. John's team that made the Elite 8 (and should have made the Final 4) off the their homecourt in the BE Final. They went out to Stanford and beat them short handed. They blew out Michigan State who made the Final 4 that year. They found ways to win games that looked lost (Khalid's jumper at Pitt, the rally from double digit 2nd half deficit at St. John's.) They had the talent, the toughness, and the consistency. They broke the Elite 8 curse and gutted out a game where everything was going wrong against Gonzaga and got Calhoun his first Final 4. They were the best team.
2004 most talented team. They had some ups and downs in the regular season especially with Okafor's back injury but Emeka, Ben, Boone, Taliek, Denham, with Rashad, Hilton, and Charlie V coming off the bench? Ridiculous. Besides Duke, no opponent they faced in the NCAA's belonged on the same court as them.
2011 is next because they won the championship and had Kemba. They went out and won 2 games on the road to make the Final 4, something every previous UConn team failed to do in the NCAA's when they played in hostile environments.
Next comes the 2009 team because they made the Final 4. I place stock it how you do in the NCAA's when it counts. Several of the 5 Elite 8 teams we had and 4 Sweet 16's could have made the Final 4 and didn't so they deserve the credit for making it.
Next comes the Elite 8 teams. 1995 the best hands down. As Palatine said they scored over 90 points in every NCAA game. If they were in any other region they'd have made the Finals against UCLA. 1990 should have made the Final 4 and had the best press in UConn history. 2006 is next. Probably the only year we should have won for sure and didn't. But they never came together. And had the worst loss in UConn history. 2002 and 1998 were about the same. Both young teams that went from NIT to Elite 8 and were a year away. They were both eliminated by the best teams in the country that year. Maryland won it all, UNC with Carter should have but didn't.
Sweet 16 1996 and 1994 both very strong. Both should have made the Final 4 but were upset by SEC teams. 1996 wouldn't have counted anyways so who cares. 2003 really peaked in the NCAA's. If they had been on a neutral court they very likely beat Texas. 1991 accomplished a lot making it that far.